------- SECIS element -- id:1 -- grade:A ---- Chromosome = OMLM01001838.1:subseq_39446,84419_ Strand = - Positions = 49717 - 49643 Found by: Infernal (score=34.26) Covels (score=31.74) Stem2 length = 10 Apical loop length = 16 Insertion in stem2 = 0, 0 Free Energy = -20.19 ..(((((((.......(((((((((((((((................)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ((((({((((--....{[[[(((((({((((................))))}))))))]]]}..--...))))}))))) target UGAAGUGAUG--UUUAUGAAGGUCUGCGCUGAAGGCAGGAAAACUGCUAGCACAGGCUGGAUGC--UCCCAUCUCUUCA **** ^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = OMLM01001838.1:subseq_39446,84419_ Strand = - Positions = 7733 - 7643 Found by: Infernal (score=12.55) Covels (score=9.31) Stem2 length = 9 Apical loop length = 15 Insertion in stem2 = 0, 0 Free Energy = -11.43 ..(((((((.....................(((((((((((((((...............))))))))))))))).........))))))).. model uucggucaugcg--------------UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc ..((((((((....................([[((({({((((((...............))))))})})))]]).....-.-)))))))).. target UUCAGCUAUGCAAAACACAAAUGCAUUAUAUGAUGGCAUCAUCACACUGCAGCAAACAGCGUGAUGUUUUCAGAAGCUUC-C-UGUAGUUGCA **** ****